Publications about MZmine

Please cite the following publication if you use MZmine 2 to analyze your data:

• T. Pluskal, S. Castillo, A. Villar-Briones, M. Orešič, MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data, BMC Bioinformatics 11:395 (2010).
  (Citations in Google Scholar)

Other publications about MZmine:

• T. Pluskal, T. Uehara, M. Yanagida, Highly accurate chemical formula prediction tool utilizing high-resolution mass spectra, MS/MS fragmentation, heuristic rules, and isotope pattern matching, Anal Chem 84(10):4396-403 (2012).
• M. Katajamaa, J. Miettinen, and M. Orešič, MZmine: Toolbox for processing and visualization of mass spectrometry based molecular profile data, Bioinformatics 22, 634-636 (2006).
  (Citations in Google Scholar)
• M. Katajamaa and M. Orešič, Processing methods for differential analysis of LC/MS profile data, BMC Bioinformatics 6:179 (2005).
  (Citations in Google Scholar)